R710 has up to 4 PCIe slots and since the error shows on PCIe slot 5 when the server is connected to IBM SAN; I advise that you engage with technical support for your SAN for best practices when connecting to server.
I "disable boot" of all slots. Now server is working fine. It seems that server was going to boot from SAN. If there is any other option than this than please advice or any settings in BIOS so i can also check this.